Using transmart-data to configure tranSMART
See https://wiki.transmartfoundation.org/display/transmartwiki/Install+the+current+official+release for instructions from tranSMART 16.3 on creating customized configuration files.
This will be updated and described in more detail in this article.
Create the tranSMART Configuration Files
To create the configuration files for the tranSMART web application and the connection to the database, read through the templates in transmart-data/config and follow the examples and comments.
Unfortunately, these instructions set up the configuration files in the configuration directory for the user transmart in the directory /home/transmart/.grails/transmartConfig, but they need instead to be in the configuration directory of the user tomcat7 which is in the directory /usr/share/tomcat7/.grails/transmartConfig. So, we copy them
Viewing the configuration
TranSMART 16.3 introduced a new page providing the values and defaults for all configuration parameters defined by the adminstrator or generated automatically by dependencies.
Login to transmartApp as admin. Go to the admin tab. On the left side menu, near the bottom, is a view config option that will display all configuration parameters, classified by fuction and scope.
At the bottom of this page is a (hopefully empty) table of unknown configuration parameters. You may find mistyped names or obsolete parameters in this section.
Where some tables are rather long they can be hidden individually to make scrolling through and searching easire.